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eyes:logics:sumbyreference [2017/06/12 16:27] vzinch |
eyes:logics:sumbyreference [2017/06/12 18:37] (current) jschlie1 |
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| ====== SumByReference ====== | ====== SumByReference ====== | ||
| - | + | This logic takes a stack of images, that were previously aligned using some references (e.g. class averages), and sums the images that correspond to the same references. This generates alisums that inherit the Euler angles from the references, thus, can be directly used for 3D reconstruction. | |
| - | This logic takes a stack of images, that were previously aligned using some references (e.g. class averages), and sums the images that correspond to same references. This generates Alisums that inherit the Euler angles from the references, thus, can be directly used for 3D reconstruction. | + | |
| ===== Usage ===== | ===== Usage ===== | ||
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| Note that when Fill gaps option is not checked, the empty sums would just be skipped, and that will affect the imageID of the summed images. | Note that when Fill gaps option is not checked, the empty sums would just be skipped, and that will affect the imageID of the summed images. | ||
| - | + | ===== Parameters ===== | |
| - | ===== Process ===== | + | |
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| | Normalize output | Normalize the summed images | | | Normalize output | Normalize the summed images | | ||
| | Ccc bounds | Whether to use the ccc between image and reference as a filter (lower and upper bounds should be given) | | | Ccc bounds | Whether to use the ccc between image and reference as a filter (lower and upper bounds should be given) | | ||
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| - | ^ Input ^ Description ^ | ||
| - | | Input | Sets of images that were previously aligned to some references | | ||
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| - | ^ Output ^ Description ^ | ||
| - | | Sums | Images summed according to alignment references (Alisums) | | ||
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| - | ===== Concept ===== | ||
| - | Basically, this logic retrieves the information about which reference this image was aligned to and sums the images according to their references. | ||