Differences

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--- eyes:logics:reconstruction [2017/06/12 14:03]
vzinch [Concept]
+++ eyes:logics:reconstruction [2017/06/12 17:33] (current)
vzinch [Usage]
@@ Line 3: / Line 3: @@
 ===== Usage =====
-FIXME
+Reconstruction in Fourier space generally takes less time than in Real space and the output is mostly the same quality.
-Here, a general/generic description of HOW the logic is USED should be given. Try to be as general as possible, but also mention prerequisites, restrictions, advantages, requirements which are specific of this logic. Basically everything the user needs to know to successfully use this logic.
+It is highly recommended to use 'Reproject 3D parameter', as comparison of output projections to input classes is the best way of estimating the quality of the generated 3D model.
@@ Line 17: / Line 17: @@
 | Normalize 3D       | Normalizes the obtained 3D structure (mean=0)  |
 | → 3D normalization sigma      | Sigma value for normalization |
-| Padding factor   | FIXME |
+| Padding factor   | Factor by which the box is padded with zeroes in fourier space |
 | Already phase flipped       | Indicate whether phase flipping was applied on the previous steps |
 | Reproject 3D   | Gives additional output of 2D reprojections of the obtained 3D structure |
 | Symmetry  | Symmetry of the complex studied (if known) |
-| With CTF      | Indicate whether header files with CTF are available |
+| With CTF      | Indicate whether header values with CTF parameters are available |
 |< 100% 30% >|