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eyes:logics:extractbymember [2017/06/09 19:09] nfische [Usage] |
eyes:logics:extractbymember [2017/06/12 19:33] (current) kbertra2 [Process] |
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| ====== ExtractByMembers ====== | ====== ExtractByMembers ====== | ||
| - | Use this logic to extract particles images based on their membership to classes as selected beforehand with the interactive logic [[:eyes:interactives:gui::extract]]. | + | Use this logic to extract particles images based on their membership to classes as selected beforehand with the interactive logic [[eyes:interactive:extract|]]. |
| ===== Usage ===== | ===== Usage ===== | ||
| - | After [[:eyes:interactives:gui::Classification]] one often wants not only to define certain class averages for further processing, but also the corresponding particles images. For this purpose, class averages have to be first selected with the interactive logic [[:eyes:interactives:gui::extract]]. This logic then allows to extract or exclude the corresponding particles from the total data. Alternatively, with the key "referenceData" this logic may be used to select particles according to their assignment to a certain reference from [[:eyes:interactives:gui::Alignment]]. | + | After [[:eyes:logics:Classification]] one often wants not only to define certain class averages for further processing, but also the corresponding particles images. For this purpose, class averages have to be first selected with the interactive logic [[eyes:interactive:extract|]]. This logic then allows to extract or exclude the corresponding particles from the total data. Alternatively, with the key "referenceData" this logic may be used to select particles according to their assignment to a certain reference from [[:eyes:logics:Alignment]]. |
| ===== Example ==== | ===== Example ==== | ||
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| ^ Parameters ^ Description ^ | ^ Parameters ^ Description ^ | ||
| - | | Work on key - //clusterMember// | Use this key to extract particles images according to their class membership | | + | | Work on key - //clusterMember// | Use this key to extract particles images according to their class membership. | |
| | Work on key - //referenceData// | Use this key to extract particles images according to their assignment to a certain reference. | | | Work on key - //referenceData// | Use this key to extract particles images according to their assignment to a certain reference. | | ||
| - | | Extract mode - //Keep selected// | All particles belonging to the chosen classes/references will be kept | | + | | Extract mode - //Keep selected// | All particles belonging to the chosen classes/references will be kept. | |
| | Extract mode - //Discard selected// | All particles belonging to the chosen classes/references will be discarded, and only particles belonging to the not chosen classes/references will be kept. | | | Extract mode - //Discard selected// | All particles belonging to the chosen classes/references will be discarded, and only particles belonging to the not chosen classes/references will be kept. | | ||
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| ^ Input ^ Description ^ | ^ Input ^ Description ^ | ||
| - | | Pre extract io | Information about the chosen class averages/references, i.e. "io::out" from the interactive logic [[:eyes:interactives:gui::extract]] | | + | | Pre extract io | Information about the chosen class averages/references, i.e. "io::out" from the interactive logic [[eyes:interactive:extract|]]. | |
| - | | In | Particle images with assigned class membership ("clusterMember") or reference | | + | | In | Particle images with assigned class membership ("clusterMember") or reference ("referenceData").| |
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| ^ Output ^ Description ^ | ^ Output ^ Description ^ | ||
| - | | FirstOutput | Extracted particle images | | + | | FirstOutput | Extracted particle images. | |