====== AliInfoAnalyzer ====== This logic analyzes the cross-correlation coefficient ("CCC") values of ali info files and adds distribution information to the header of the images. ===== Process ===== |< 100% 30% >| ^ Parameters ^ Description ^ | Number of CCC Values to analyze | The number of CCC values that are analyzed during the processor (default 10); maximum is the total number of CCC values stored in the ali info file. | |< 100% 30% >| ^ Input ^ Description ^ | AliInfo | AliInfo files that were written during the alignment process. | | SMLs | Aligned single particle images. | |< 100% 30% >| ^ Output ^ Description ^ | FirstOutput | Aligned single particle images with additional header information | |< 100% 30% >| ^ New/Changed Header Values ^ Description ^ | ccc_peak | The maximum ccc value, which is the correlation coefficient of the best fitting reference image. | | ccc_mean | The mean of the “Number of CCC Values to analyze” next highest CCC values. | | ccc_sdev | The standard deviation of the “Number of CCC Values to analyze” next highest CCC values. |